From d4f8828fcf376cdda402cf327de743290de0b465 Mon Sep 17 00:00:00 2001
From: Schankula Christopher <schankuc@mcmaster.ca>
Date: Wed, 7 Mar 2018 10:01:38 -0500
Subject: [PATCH] error handling for nameToID
---
src/biotree/TestBioTree.java | 5 ++++-
src/biotree/WormsAPI.java | 4 ++--
2 files changed, 6 insertions(+), 3 deletions(-)
diff --git a/src/biotree/TestBioTree.java b/src/biotree/TestBioTree.java
index 67005ca..3257bf2 100644
--- a/src/biotree/TestBioTree.java
+++ b/src/biotree/TestBioTree.java
@@ -2,13 +2,15 @@ package biotree;
import static org.junit.Assert.*;
+import java.io.IOException;
+
import org.junit.Before;
import org.junit.Test;
public class TestBioTree {
@Before
- public static void main(String[] args) {
+ public static void main(String[] args) throws IOException {
BioTree.init();
BioTree.processRecord(125125);
BioTree.processRecord(125125);
@@ -29,6 +31,7 @@ public class TestBioTree {
//System.out.println(String.format("%-26s %s", nodes.get(i).getName(), nodes.get(i).getTaxonType()));
//}
BioTree.printTree();
+ System.out.println(WormsAPI.nameToID("Hello"));
}
diff --git a/src/biotree/WormsAPI.java b/src/biotree/WormsAPI.java
index 79c0cca..ac595ae 100644
--- a/src/biotree/WormsAPI.java
+++ b/src/biotree/WormsAPI.java
@@ -38,11 +38,11 @@ public class WormsAPI {
* @return Aphia (taxon) ID of given scientific name.
* @throws IOException
*/
- public static int nameToID(String scientificName) throws IOException {
+ public static Integer nameToID(String scientificName) throws IOException {
scientificName = repSpaces(scientificName);
String resp = makeRequest(
String.format("http://marinespecies.org/rest/AphiaIDByName/%s?marine_only=false", scientificName));
-
+ if (resp.length() == 0) return null;
return Integer.parseInt(resp);
}
--
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