Edits related to introduction and getting started lectures

Lectures/L01_IntroToCourse/IntroToCourse.tex

@@ -411,8 +411,8 @@ the transcript, and/or suspension or expulsion from the university.
 
 \begin {itemize}
 
-\item \bibentry{Smith2016}
-\item \bibentry{SmithEtAl2007}
+\item \href{https://gitlab.cas.mcmaster.ca/smiths/cas741/blob/master/ReferenceMaterial/SoftEngForScienceBook.pdf}{\bibentry{Smith2016}}
+\item \href{https://gitlab.cas.mcmaster.ca/smiths/cas741/blob/master/ReferenceMaterial/SmithLaiAndKhedri2007fulltext.pdf}{\bibentry{SmithEtAl2007}}
 
 \end{itemize}
 

ReferenceMaterial/References.bib

@@ -2,13 +2,166 @@
 %% http://bibdesk.sourceforge.net/
 
 
-%% Created for Spencer Smith at 2017-09-07 14:15:00 -0400 
+%% Created for Spencer Smith at 2017-09-08 00:00:23 -0400 
 
 
 %% Saved with string encoding Unicode (UTF-8) 
 
 
 
+@inproceedings{Parnas2010,
+	Author = {David Lorge Parnas},
+	Bibsource = {dblp computer science bibliography, http://dblp.org},
+	Biburl = {http://dblp.uni-trier.de/rec/bib/conf/birthday/Parnas10},
+	Booktitle = {The Future of Software Engineering},
+	Date-Added = {2017-09-08 04:00:01 +0000},
+	Date-Modified = {2017-09-08 04:00:01 +0000},
+	Doi = {10.1007/978-3-642-15187-3_8},
+	Pages = {125--148},
+	Timestamp = {Tue, 30 Aug 2011 14:09:42 +0200},
+	Title = {Precise Documentation: The Key to Better Software},
+	Url = {http://dx.doi.org/10.1007/978-3-642-15187-3_8},
+	Year = {2010},
+	Bdsk-File-1 = {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},
+	Bdsk-Url-1 = {http://dx.doi.org/10.1007/978-3-642-15187-3_8}}
+
+@book{Roache1998,
+	Address = {Albuquerque, New Mexico},
+	Author = {Patrick J. Roache},
+	Date-Added = {2017-09-08 03:59:45 +0000},
+	Date-Modified = {2017-09-08 03:59:45 +0000},
+	Publisher = {Hermosa Publishers},
+	Title = {Verification and Validation in Computational Science and Engineering},
+	Year = {1998}}
+
+@article{SegalAndMorris2008,
+	Annote = {Some extra information on the citation.
+
+@article{Segal2008IEEE,
+	Address = {Los Alamitos, CA, USA},
+	Author = {Segal, Judith and Morris, Chris},
+	Date-Added = {2011-01-28 14:00:17 -0500},
+	Date-Modified = {2011-01-28 14:00:35 -0500},
+	Doi = {http://dx.doi.org/10.1109/MS.2008.85},
+	Issn = {0740-7459},
+	Journal = {IEEE Softw.},
+	Number = {4},
+	Pages = {18--20},
+	Publisher = {IEEE Computer Society Press},
+	Title = {Developing Scientific Software},
+	Url = {http://cs.ua.edu/\~{}SECSE08/Papers/Segal.pdf},
+	Volume = {25},
+	Year = {2008},
+	Bdsk-Url-1 = {http://cs.ua.edu/%5C~%7B%7DSECSE08/Papers/Segal.pdf},
+	Bdsk-Url-2 = {http://dx.doi.org/10.1109/MS.2008.85}}},
+	Author = {Judith Segal and Chris Morris},
+	Date-Added = {2017-09-08 03:59:33 +0000},
+	Date-Modified = {2017-09-08 03:59:33 +0000},
+	Journal = {IEEE Software},
+	Local-Url = {/Users/smiths/LongTermArchives/Work/Research/References/SciCompAndSoftEng/SegalAndMorris2008.pdf},
+	Month = {July/August},
+	Number = {4},
+	Pages = {18--20},
+	Title = {Developing Scientific Software},
+	Volume = {25},
+	Year = {2008},
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+
+@article{Kelly2015,
+	Author = {Diane Kelly},
+	Bibsource = {dblp computer science bibliography, http://dblp.org},
+	Biburl = {http://dblp.uni-trier.de/rec/bib/journals/jss/Kelly15},
+	Date-Added = {2017-09-08 03:59:12 +0000},
+	Date-Modified = {2017-09-08 03:59:12 +0000},
+	Doi = {10.1016/j.jss.2015.07.027},
+	Journal = {Journal of Systems and Software},
+	Pages = {50--61},
+	Timestamp = {Thu, 26 Nov 2015 09:26:40 +0100},
+	Title = {Scientific software development viewed as knowledge acquisition: Towards understanding the development of risk-averse scientific software},
+	Url = {http://dx.doi.org/10.1016/j.jss.2015.07.027},
+	Volume = {109},
+	Year = {2015},
+	Bdsk-File-1 = {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},
+	Bdsk-Url-1 = {http://dx.doi.org/10.1016/j.jss.2015.07.027}}
+
+@inproceedings{Kelly2013,
+	Acmid = {2555555},
+	Address = {Riverton, NJ, USA},
+	Author = {Kelly, Diane},
+	Booktitle = {Proceedings of the 2013 Conference of the Center for Advanced Studies on Collaborative Research},
+	Date-Added = {2017-09-08 03:59:00 +0000},
+	Date-Modified = {2017-09-08 03:59:00 +0000},
+	Location = {Ontario, Canada},
+	Numpages = {12},
+	Pages = {299--310},
+	Publisher = {IBM Corp.},
+	Series = {CASCON '13},
+	Title = {Industrial Scientific Software: A Set of Interviews on Software Development},
+	Url = {http://dl.acm.org/citation.cfm?id=2555523.2555555},
+	Year = {2013},
+	Bdsk-File-1 = {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}}
+
+@article{EasterbrookAndJohns2009,
+	Address = {Los Alamitos, CA, USA},
+	Author = {Easterbrook, Steve M. and Johns, Timothy C.},
+	Date-Added = {2017-09-08 03:58:34 +0000},
+	Date-Modified = {2017-09-08 03:58:34 +0000},
+	Doi = {http://dx.doi.org/10.1109/MCSE.2009.193},
+	Issn = {0740-7475},
+	Journal = {Comuting in Science \& Engineering},
+	Month = {November/December},
+	Number = {6},
+	Pages = {65--74},
+	Publisher = {IEEE Computer Society Press},
+	Title = {Engineering the Software for Understanding Climate Change},
+	Volume = {11},
+	Year = {2009},
+	Bdsk-File-1 = {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},
+	Bdsk-Url-1 = {http://dx.doi.org/10.1109/MCSE.2009.193}}
+
+@inproceedings{CarverEtAl2007,
+	Address = {Washington, DC, USA},
+	Author = {Jeffrey C. Carver and Richard P. Kendall and Susan E. Squires and Douglass E. Post},
+	Booktitle = {ICSE '07: Proceedings of the 29th International Conference on Software Engineering},
+	Date-Added = {2017-09-08 03:58:12 +0000},
+	Date-Modified = {2017-09-08 03:58:12 +0000},
+	Doi = {http://dx.doi.org/10.1109/ICSE.2007.77},
+	Isbn = {0-7695-2828-7},
+	Local-Url = {file://localhost/Users/smiths/LongTermArchives/Work/Research/References/SciCompAndSoftEng/CarverEtAl2007.pdf},
+	Pages = {550--559},
+	Publisher = {IEEE Computer Society},
+	Title = {Software Development Environments for Scientific and Engineering Software: A Series of Case Studies},
+	Year = {2007},
+	Bdsk-File-1 = {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},
+	Bdsk-Url-1 = {http://dx.doi.org/10.1109/ICSE.2007.77}}
+
+@article{AckroydEtAl2008,
+	Author = {Karen S. Ackroyd and Steve H. Kinder and Geoff R. Mant and Mike C. Miller and Christine A. Ramsdale and Paul C. Stephenson},
+	Date-Added = {2017-09-08 03:57:39 +0000},
+	Date-Modified = {2017-09-08 03:57:39 +0000},
+	Journal = {IEEE Software},
+	Local-Url = {/Users/smiths/LongTermArchives/Work/Research/References/SciCompAndSoftEng/AckroydEtAl2008.pdf},
+	Month = {July/August},
+	Number = {4},
+	Pages = {44--51},
+	Title = {Scientific Software Development at a Research Facility},
+	Volume = {25},
+	Year = {2008},
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+
+@book{VanVliet2000,
+	Address = {New York, NY, USA},
+	Author = {Hans van Vliet},
+	Date-Added = {2017-09-08 03:57:00 +0000},
+	Date-Modified = {2017-09-08 03:57:00 +0000},
+	Isbn = {0-471-97508-7},
+	Publisher = {John Wiley \& Sons, Inc.},
+	Title = {Software Engineering (2nd ed.): Principles and Practice},
+	Year = {2000},
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+
 @article{TaschukAndWilson2017,
 	Abstract = {{[Abstract]